Recent & Selected Publications
- A. Lussier, A. Keinan. Crowdsourced genealogies and genomes. Science, 360(6385): 153-154 (2018) [PDF]
- K. Ye, F. Gao, D. Wang, O. Bar-Yosef, A. Keinan. Dietary adaptation of FADS genes in Europe varied across time and geography. Nature Ecology and Evolution, 1(7):167 (2017) [PDF]
- Y. Pinto, O. Gabay, L. Arbiza, A.J. Sams, A. Keinan^, E.Y. Levanon^. Clustered mutations in hominid genome evolution are consistent with APOBEC3G enzymatic activity. Genome Research, 26(5): 579-87 (2016)
- K.S.D. Kothapalli*, K. Ye*, M.S. Gadgil, S.E. Carlson , K.O. O'Brien, J.Y.Zhang, H.G. Park, K. Ojukwu, J. Zou, S.S. Hyon, K.S. Joshi, Z. Gu, A. Keinan^, J.T. Brenna^. Positive selection on a regulatory insertion-deletion polymorphism in FADS2 influences apparent endogenous synthesis of arachidonic acid. Molecular Biology and Evolution, 33(7):1726-39 (2016)
- Y. Waldman, A. Biddanda, M. Dubrovsky, C. Campbell, C. Oddoux, E. Friedman, G. Atzmon, E. Halperin, E. Halperin, H. Ostrer, A. Keinan. The genetic history of Cochin Jews from India. Human Genetics, 135(10):1127-43 (2016)
- F. Gao, A. Keinan. Inference of Super-exponential Human Population Growth via Efficient Computation of the Site Frequency Spectrum for Generalized Models. Genetics, 202: 235-245 (2016)
- A. Slavney, L. Arbiza, A.G. Clark^, A. Keinan^. Strong Constraint on Human Genes Escaping X-Inactivation Is Modulated by their Expression Level and Breadth in Both Sexes. Molecular Biology and Evolution, 33(2): 384-393 (2015)
- F. Gao*, D. Chang*, A. Biddanda*, L. Ma, Y. Guo, Z. Zhou, A. Keinan. XWAS: a toolset for genetic data analysis and association studies of the X chromosome. Journal of Heredity, 106(5): 6 (2015)
- L. Arbiza*, S. Gottipati*, A. Siepel, A. Keinan. Contrasting X-linked and autosomal diversity across 14 human populations. American Journal of Human Genetics, 94(6):827-44 (2014).
- E. Gazave*, L. Ma*, D. Chang*, A. Coventry, F. Gao, D. Muzny, E. Boerwinkle, R. Gibbs, C. F. Sing, A. G. Clark, A. Keinan. Neutral genomic regions refine models of recent rapid human population growth. Proceedings of the National Academy of Sciences, 11, 757-762 (2014).
- K. Ye, J. Lu, F. Ma, A. Keinan, Z. Gu. Extensive pathogenicity of mitochondrial heteroplasmy in healthy human individuals. Proceedings of the National Academy of Sciences, 111(29):10654-10659 (2014)
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- L. Ma, A. G. Clark, A. Keinan. Gene-Based Testing of Interactions in Association Studies of Quantitative Traits. PLoS Genetics, 9, e1003321 (2013).
- L. Arbiza, I. Gronau, B.A. Aksoy, M.J. Hubisz, B. Gulko, A. Keinan, A. Siepel. Genome-wide inference of natural selection on human transcription factor binding sites. Nature Genetics, 45:723–729 (2013) (Supplementary Information)
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- A. Keinan, A. G. Clark. Recent explosive human population growth has resulted in an excess of rare genetic variants. Science, 336, 740-743 (2012). (Supplementary information)